Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2135 domain-containing protein | D3C88_02685 | Not Available | Negative | 420385 - 421161 | 28245.2 |
| duf2300 domain-containing protein | D3C88_02690 | Not Available | Negative | 421166 - 421428 | 10419.5 |
| glucuronate isomerase | D3C88_02695 | Not Available | Negative | 421429 - 422344 | 35040.2 |
| mfs transporter | D3C88_02700 | Not Available | Positive | 422827 - 424125 | 46909.0 |
| gntr family transcriptional regulator | D3C88_02705 | Not Available | Positive | 424255 - 424641 | 14732.7 |
| integration host factor subunit beta | D3C88_02710 | Not Available | Positive | 424642 - 424826 | 6803.07 |
| dna internalization-related competence protein comec/rec2 | D3C88_02715 | Not Available | Positive | 425032 - 425858 | 29980.5 |
| rok family protein | D3C88_02720 | Not Available | Negative | 425859 - 426513 | 23147.7 |
| ketose-bisphosphate aldolase | D3C88_02725 | Not Available | Negative | 426561 - 427421 | 30815.0 |
| aldolase | D3C88_02730 | Not Available | Negative | 427502 - 428353 | 30006.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





