Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5107 domain-containing protein | D3C88_02635 | Not Available | Positive | 414274 - 414511 | 8749.5 |
| duf5107 domain-containing protein | D3C88_02640 | Not Available | Positive | 414512 - 415141 | 23679.6 |
| protoporphyrinogen oxidase | D3C88_02645 | Not Available | Negative | 415142 - 415298 | 6035.13 |
| trk system potassium transporter trkh | D3C88_02650 | Not Available | Negative | 415310 - 416699 | 50590.7 |
| permease | D3C88_02655 | Not Available | Positive | 416700 - 417191 | 17364.0 |
| osmotically-inducible protein osmy | D3C88_02660 | Not Available | Negative | 417304 - 417879 | 20029.1 |
| dnaa initiator-associating protein diaa | D3C88_02665 | Not Available | Negative | 417889 - 418479 | 21091.4 |
| yran family protein | D3C88_02670 | Not Available | Negative | 418499 - 418894 | 14798.5 |
| penicillin-binding protein activator | D3C88_02675 | Not Available | Negative | 418852 - 419860 | 35713.1 |
| acetyl-coa c-acetyltransferase | D3C88_02680 | Not Available | Positive | 419861 - 420311 | 14910.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





