Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slc13 family permease | D3C88_02325 | Not Available | Negative | 369246 - 370237 | 36399.6 |
| yfbu family protein | D3C88_02335 | Not Available | Negative | 370985 - 371479 | 19537.4 |
| duf412 domain-containing protein | D3C88_02340 | Not Available | Negative | 371562 - 371769 | 7775.41 |
| m48 family peptidase | D3C88_02345 | Not Available | Positive | 371770 - 372046 | 10290.0 |
| arsenate reductase (glutaredoxin) | D3C88_02350 | Not Available | Positive | 372067 - 372314 | 9523.55 |
| hypothetical protein | D3C88_02355 | Not Available | Positive | 372315 - 372563 | 9539.19 |
| cytochrome bd-i ubiquinol oxidase subunit cyda | D3C88_02360 | Not Available | Positive | 372564 - 373254 | 25527.9 |
| primosomal replication protein n | D3C88_02365 | Not Available | Positive | 373270 - 373584 | 11472.9 |
| 30s ribosomal protein s18 | D3C88_02370 | Not Available | Positive | 373589 - 373816 | 8986.94 |
| 50s ribosomal protein l9 | D3C88_02375 | Not Available | Positive | 373858 - 374307 | 15770.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





