Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3C88_02275 | Not Available | Positive | 360967 - 361288 | 11807.4 |
| si-specific nad(p)(+) transhydrogenase | D3C88_02280 | Not Available | Negative | 361289 - 362670 | 50919.6 |
| amidohydrolase | D3C88_02285 | Not Available | Positive | 363000 - 363435 | 16273.5 |
| type i glyceraldehyde-3-phosphate dehydrogenase | D3C88_02290 | Not Available | Negative | 363436 - 364044 | 21972.3 |
| peptide-methionine (r)-s-oxide reductase | D3C88_02295 | Not Available | Positive | 364386 - 364799 | 15466.0 |
| duf1315 family protein | D3C88_02300 | Not Available | Positive | 364841 - 365113 | 10326.5 |
| ydbh family protein | D3C88_02305 | Not Available | Positive | 365653 - 367354 | 62468.3 |
| ynbe family lipoprotein | D3C88_02310 | Not Available | Positive | 367351 - 367536 | 6840.53 |
| duf1318 domain-containing protein | D3C88_02315 | Not Available | Positive | 367544 - 367870 | 11994.5 |
| ents/ybda mfs transporter | D3C88_02320 | Not Available | Positive | 368246 - 369245 | 34677.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





