Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna packaging protein | D3C88_26310 | Not Available | Positive | 3837330 - 3837875 | 20521.5 |
| Dna packaging protein | D3C88_26315 | Not Available | Positive | 3837850 - 3839775 | 73276.5 |
| Head-tail joining protein | D3C88_26320 | Not Available | Positive | 3839772 - 3839978 | 7613.19 |
| Capsid component | D3C88_26325 | Not Available | Positive | 3839975 - 3841576 | 59486.9 |
| Capsid component | D3C88_26330 | Not Available | Positive | 3841557 - 3842876 | 45964.4 |
| Head-dna stabilization protein | D3C88_26335 | Not Available | Positive | 3842886 - 3843218 | 11615.6 |
| Capsid component | D3C88_26340 | Not Available | Positive | 3843274 - 3844299 | 38165.4 |
| Dna packaging protein | D3C88_26345 | Not Available | Positive | 3844341 - 3844736 | 14005.3 |
| Head-tail joining protein | D3C88_26350 | Not Available | Positive | 3844748 - 3845101 | 12704.8 |
| Tail component | D3C88_26355 | Not Available | Positive | 3845113 - 3845530 | 15350.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





