Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate coa-transferase subunit alpha | D3C88_02115 | Not Available | Negative | 334136 - 334798 | 23522.7 |
| acetoacetate metabolism regulator atoc | D3C88_02120 | Not Available | Negative | 334994 - 336379 | 52091.4 |
| two-component system sensor histidine kinase atos | D3C88_02125 | Not Available | Negative | 336376 - 338202 | 67844.2 |
| two-component system sensor histidine kinase/response regulator | D3C88_02130 | Not Available | Positive | 338369 - 339084 | 27580.9 |
| alpha,alpha-trehalase | D3C88_02135 | Not Available | Negative | 339085 - 339624 | 20374.3 |
| dihydroxyacetone kinase subunit dham | D3C88_02140 | Not Available | Negative | 339943 - 341361 | 51577.7 |
| dihydroxyacetone kinase subunit l | D3C88_02145 | Not Available | Negative | 341372 - 342004 | 22647.1 |
| dihydroxyacetone kinase subunit dhak | D3C88_02150 | Not Available | Negative | 342015 - 343085 | 38264.4 |
| sigma-54-dependent fis family transcriptional regulator | D3C88_02155 | Not Available | Positive | 343313 - 343610 | 11091.3 |
| ycjx family protein | D3C88_02160 | Not Available | Negative | 343611 - 344001 | 14709.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





