Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D3C88_02015 | Not Available | Positive | 312788 - 313570 | 28981.0 |
| dna-binding transcriptional regulator cpxr | D3C88_02020 | Not Available | Positive | 313719 - 314417 | 26315.7 |
| hamp domain-containing protein | D3C88_02025 | Not Available | Positive | 314414 - 315118 | 26705.7 |
| type vi secretion system contractile sheath small subunit | D3C88_02030 | Not Available | Positive | 315492 - 315992 | 18726.3 |
| type vi secretion system contractile sheath large subunit | D3C88_02035 | Not Available | Positive | 316051 - 317589 | 58021.7 |
| type vi secretion system baseplate subunit tssk | D3C88_02040 | Not Available | Positive | 317607 - 318944 | 49718.8 |
| dotu family type iv/vi secretion system protein | D3C88_02045 | Not Available | Positive | 318941 - 319606 | 25311.8 |
| ompa family protein | D3C88_02050 | Not Available | Positive | 319619 - 319911 | 10563.2 |
| cytosine permease | D3C88_02055 | Not Available | Positive | 319912 - 321066 | 39953.8 |
| cytosine deaminase | D3C88_02060 | Not Available | Positive | 321056 - 322339 | 47578.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





