Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopentomutase | D3C88_01590 | Not Available | Positive | 246577 - 247264 | 24899.9 |
| abc transporter permease | D3C88_01595 | Not Available | Positive | 247265 - 247774 | 17308.9 |
| alcohol dehydrogenase | D3C88_01600 | Not Available | Positive | 247840 - 248901 | 38053.0 |
| aldose 1-epimerase | D3C88_01605 | Not Available | Positive | 248913 - 249449 | 20356.8 |
| polynucleotide adenylyltransferase | D3C88_01610 | Not Available | Positive | 249450 - 250016 | 22136.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | D3C88_01615 | Not Available | Positive | 250013 - 250427 | 15458.8 |
| type ii secretion system protein gspf | D3C88_01620 | Not Available | Positive | 250428 - 251079 | 23921.9 |
| type ii secretion system protein gspg | D3C88_01625 | Not Available | Positive | 251089 - 251526 | 15925.1 |
| type ii secretion system protein gsph | D3C88_01630 | Not Available | Positive | 251534 - 251964 | 15762.8 |
| is4 family transposase | D3C88_01635 | Not Available | Negative | 251965 - 252231 | 10073.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





