Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1983 domain-containing protein | D3C88_16410 | Not Available | Negative | 2263396 - 2264469 | 38928.3 |
| sodium/panthothenate symporter | D3C88_16415 | Not Available | Negative | 2264558 - 2264788 | 8277.32 |
| duf997 family protein | D3C88_16420 | Not Available | Negative | 2264778 - 2265000 | 8230.21 |
| hydrogenase large subunit | D3C88_16425 | Not Available | Negative | 2265001 - 2265653 | 25192.8 |
| hydrogenase 3 membrane subunit | D3C88_16430 | Not Available | Negative | 2265671 - 2266332 | 23476.3 |
| hypothetical protein | D3C88_16435 | Not Available | Positive | 2266333 - 2266644 | 11490.8 |
| duf441 family protein | D3C88_16440 | Not Available | Positive | 2266645 - 2266788 | 4567.93 |
| arac family transcriptional regulator | D3C88_16445 | Not Available | Negative | 2266745 - 2266904 | 5538.59 |
| phosphonate c-p lyase system protein phnl | D3C88_16450 | Not Available | Negative | 2266905 - 2267382 | 17462.2 |
| atp-binding cassette domain-containing protein | D3C88_16455 | Not Available | Negative | 2267493 - 2267954 | 16814.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





