Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| host specificity protein j | D3C88_16310 | Not Available | Positive | 2249437 - 2249952 | 18608.0 |
| porin | D3C88_16315 | Not Available | Positive | 2249953 - 2250812 | 31551.1 |
| antitermination protein | D3C88_16320 | Not Available | Negative | 2251001 - 2251384 | 14165.3 |
| multidrug transporter subunit mdtc | D3C88_16325 | Not Available | Positive | 2251562 - 2252056 | 17307.2 |
| khg/kdpg aldolase | D3C88_16330 | Not Available | Negative | 2252152 - 2252793 | 22285.3 |
| phosphogluconate dehydratase | D3C88_16335 | Not Available | Negative | 2252830 - 2252976 | 5114.01 |
| ethanolamine utilization acetate kinase eutq | D3C88_16340 | Not Available | Positive | 2252977 - 2253145 | 6096.38 |
| cobalamin adenosyltransferase | D3C88_16345 | Not Available | Positive | 2253142 - 2253344 | 7876.26 |
| integrase | D3C88_16350 | Not Available | Positive | 2253345 - 2253555 | 7555.83 |
| site-specific integrase | D3C88_16355 | Not Available | Positive | 2253669 - 2254234 | 22355.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





