Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter kup | D3C88_01235 | Not Available | Negative | 193666 - 194000 | 13017.8 |
| arginine decarboxylase | D3C88_01240 | Not Available | Negative | 194001 - 194584 | 21931.5 |
| virulence promoting factor | D3C88_01245 | Not Available | Negative | 194593 - 194724 | 4859.08 |
| hypothetical protein | D3C88_01250 | Not Available | Positive | 194860 - 195075 | 8148.99 |
| duf2684 family protein | D3C88_01255 | Not Available | Negative | 195072 - 195323 | 9534.78 |
| s-adenosylmethionine synthase | D3C88_01260 | Not Available | Positive | 195379 - 196533 | 41954.0 |
| hypothetical protein | D3C88_01265 | Not Available | Positive | 196617 - 196811 | 7508.04 |
| sugar porter family mfs transporter | D3C88_01270 | Not Available | Positive | 196970 - 198089 | 40803.1 |
| alanine racemase | D3C88_01275 | Not Available | Positive | 198090 - 198312 | 7633.49 |
| hypothetical protein | D3C88_01280 | Not Available | Negative | 198369 - 198605 | 8554.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





