Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | D3C88_16155 | Not Available | Positive | 2232986 - 2233246 | 9400.24 |
| carbohydrate kinase | D3C88_16165 | Not Available | Positive | 2236227 - 2236604 | 14496.5 |
| anaerobic c4-dicarboxylate transporter | D3C88_16170 | Not Available | Positive | 2236605 - 2237433 | 29846.0 |
| class i fumarate hydratase | D3C88_16175 | Not Available | Positive | 2237511 - 2239157 | 60119.7 |
| duf2238 domain-containing protein | D3C88_16180 | Not Available | Positive | 2239280 - 2239403 | 4523.79 |
| 4fe-4s dicluster domain-containing protein | D3C88_16185 | Not Available | Negative | 2239404 - 2239798 | 14621.6 |
| hydrogenase large subunit | D3C88_16190 | Not Available | Negative | 2239808 - 2240800 | 37365.4 |
| transketolase | D3C88_16195 | Not Available | Positive | 2240801 - 2241641 | 30692.2 |
| acyl carrier protein | D3C88_16200 | Not Available | Negative | 2241642 - 2241867 | 8279.78 |
| response regulator | D3C88_16205 | Not Available | Negative | 2241868 - 2242015 | 5389.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





