Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna 2',3'-cyclic phosphodiesterase | D3C88_15755 | Not Available | Negative | 2181150 - 2181242 | 3766.58 |
| atp-dependent helicase hrpb | D3C88_15760 | Not Available | Positive | 2181316 - 2182379 | 38464.1 |
| flagellum-specific atp synthase flii | D3C88_15765 | Not Available | Positive | 2182380 - 2182940 | 19828.3 |
| 30s ribosome-binding factor rbfa | D3C88_15770 | Not Available | Positive | 2182941 - 2183311 | 13854.8 |
| phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | D3C88_15775 | Not Available | Positive | 2183326 - 2184464 | 42538.1 |
| hypothetical protein | D3C88_15780 | Not Available | Positive | 2184502 - 2184696 | 7186.74 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | D3C88_15785 | Not Available | Positive | 2184713 - 2185277 | 20647.0 |
| hd domain-containing protein | D3C88_15790 | Not Available | Positive | 2185325 - 2185752 | 15736.0 |
| glycine--trna ligase subunit alpha | D3C88_15795 | Not Available | Negative | 2185753 - 2186273 | 19753.6 |
| hypothetical protein | D3C88_15800 | Not Available | Negative | 2186368 - 2186667 | 11316.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





