Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3C88_15445 | Not Available | Negative | 2138375 - 2138554 | 6649.35 |
| gtpase family protein | D3C88_15450 | Not Available | Negative | 2138736 - 2139146 | 15110.0 |
| four-carbon acid sugar kinase family protein | D3C88_15455 | Not Available | Positive | 2139199 - 2140347 | 40968.9 |
| aldolase | D3C88_15460 | Not Available | Positive | 2140344 - 2140982 | 23296.8 |
| hpr family phosphocarrier protein | D3C88_15465 | Not Available | Positive | 2140987 - 2141763 | 29234.6 |
| hypothetical protein | D3C88_15470 | Not Available | Positive | 2141852 - 2142176 | 10944.3 |
| carbamate kinase | D3C88_15475 | Not Available | Positive | 2142177 - 2142540 | 12636.2 |
| glutamyl-trna amidotransferase | D3C88_15480 | Not Available | Positive | 2142557 - 2142633 | 2775.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | D3C88_15485 | Not Available | Positive | 2142634 - 2143503 | 31787.1 |
| hypothetical protein | D3C88_15490 | Not Available | Positive | 2143740 - 2143994 | 9634.91 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





