Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase nrfefg subunit nrfe | D3C88_15395 | Not Available | Negative | 2131203 - 2132066 | 31774.5 |
| membrane transport protein | D3C88_15400 | Not Available | Positive | 2132067 - 2132563 | 17258.4 |
| malate/lactate/ureidoglycolate dehydrogenase | D3C88_15405 | Not Available | Negative | 2132564 - 2133089 | 18655.4 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | D3C88_15410 | Not Available | Negative | 2133213 - 2133785 | 21146.2 |
| atp-binding cassette domain-containing protein | D3C88_15415 | Not Available | Positive | 2133973 - 2134119 | 5162.39 |
| radical sam protein | D3C88_15420 | Not Available | Positive | 2134120 - 2134427 | 11531.9 |
| duf945 domain-containing protein | D3C88_15425 | Not Available | Negative | 2134428 - 2135134 | 27060.3 |
| cytoplasmic protein | D3C88_15430 | Not Available | Negative | 2135155 - 2135289 | 5062.03 |
| duf905 domain-containing protein | D3C88_15435 | Not Available | Negative | 2135289 - 2135483 | 7206.46 |
| autotransporter adhesin ag43 | D3C88_15440 | Not Available | Negative | 2135518 - 2138364 | 97496.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





