Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine-5'-phosphate glycosidase | D3C88_15240 | Not Available | Negative | 2113366 - 2113644 | 9794.67 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | D3C88_15245 | Not Available | Positive | 2113645 - 2113906 | 9647.42 |
| phosphonate metabolism protein phnp | D3C88_15250 | Not Available | Positive | 2113950 - 2114374 | 15463.5 |
| hypothetical protein | D3C88_15255 | Not Available | Positive | 2114487 - 2114765 | 10039.3 |
| yjbh domain-containing protein | D3C88_15260 | Not Available | Negative | 2114812 - 2116908 | 78493.1 |
| hypothetical protein | D3C88_15265 | Not Available | Negative | 2116908 - 2117645 | 26247.3 |
| hypothetical protein | D3C88_15270 | Not Available | Negative | 2117642 - 2117767 | 4912.69 |
| pts trehalose transporter subunit iibc | D3C88_15275 | Not Available | Positive | 2117768 - 2118004 | 8240.61 |
| alpha,alpha-phosphotrehalase | D3C88_15280 | Not Available | Positive | 2118054 - 2119709 | 63849.1 |
| anaerobic ribonucleoside-triphosphate reductase | D3C88_15285 | Not Available | Positive | 2120103 - 2122004 | 71528.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





