Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | D3C88_15070 | Not Available | Positive | 2095294 - 2095408 | 3889.69 |
| adenosine deaminase | D3C88_15075 | Not Available | Negative | 2095444 - 2095909 | 16732.8 |
| phosphonate metabolism protein phnp | D3C88_15080 | Not Available | Positive | 2095910 - 2096159 | 9281.13 |
| protein yjdp | D3C88_15085 | Not Available | Negative | 2096187 - 2096516 | 13439.4 |
| ribose 5-phosphate isomerase b | D3C88_15090 | Not Available | Negative | 2096585 - 2097034 | 16102.3 |
| murr/rpir family transcriptional regulator | D3C88_15100 | Not Available | Positive | 2097393 - 2098283 | 32364.1 |
| d-allose transporter substrate-binding protein | D3C88_15105 | Not Available | Positive | 2098342 - 2099277 | 32897.7 |
| d-allose abc transporter atp-binding protein alsa | D3C88_15110 | Not Available | Positive | 2099404 - 2100936 | 56788.4 |
| pts mannitol transporter subunit iicba | D3C88_15120 | Not Available | Positive | 2101666 - 2101939 | 10212.1 |
| hypothetical protein | D3C88_15125 | Not Available | Negative | 2101940 - 2102281 | 13127.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





