Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | D3C88_15015 | Not Available | Positive | 2087825 - 2088241 | 14979.7 |
| thiamine abc transporter substrate binding subunit | D3C88_15025 | Not Available | Negative | 2089015 - 2089749 | 27277.6 |
| transcriptional regulator malt | D3C88_15030 | Not Available | Negative | 2089771 - 2090360 | 22749.2 |
| abc transporter permease | D3C88_15035 | Not Available | Positive | 2090361 - 2090954 | 21378.1 |
| pts glucose transporter subunit iibc | D3C88_15040 | Not Available | Negative | 2090955 - 2091261 | 10397.2 |
| metal-dependent hydrolase | D3C88_15045 | Not Available | Negative | 2091556 - 2092353 | 29810.4 |
| dna polymerase iii subunit delta' | D3C88_15050 | Not Available | Negative | 2092364 - 2092658 | 10794.3 |
| hypothetical protein | D3C88_15055 | Not Available | Negative | 2092659 - 2092992 | 12665.2 |
| sugar phosphate isomerase/epimerase | D3C88_15060 | Not Available | Negative | 2093022 - 2093563 | 20321.7 |
| murein transglycosylase | D3C88_15065 | Not Available | Positive | 2093645 - 2095293 | 62501.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





