Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sel1 repeat family protein | D3C88_14965 | Not Available | Positive | 2083793 - 2084085 | 10302.9 |
| helix-turn-helix domain-containing protein | D3C88_14970 | Not Available | Positive | 2084086 - 2084453 | 14315.9 |
| hth-type transcriptional activator rhar | D3C88_14975 | Not Available | Positive | 2084437 - 2085015 | 21754.0 |
| hypothetical protein | D3C88_14980 | Not Available | Positive | 2085016 - 2085261 | 8841.08 |
| formate hydrogenlyase | D3C88_14985 | Not Available | Negative | 2085262 - 2085417 | 5211.38 |
| 4fe-4s dicluster domain-containing protein | D3C88_14990 | Not Available | Negative | 2085414 - 2085747 | 11852.2 |
| cupin domain-containing protein | D3C88_14995 | Not Available | Positive | 2085788 - 2085986 | 7750.13 |
| putrescine-ornithine antiporter | D3C88_15000 | Not Available | Negative | 2086042 - 2086353 | 11208.9 |
| thiol:disulfide interchange protein dsbg | D3C88_15005 | Not Available | Negative | 2086354 - 2086572 | 7929.02 |
| alkyl hydroperoxide reductase subunit c | D3C88_15010 | Not Available | Positive | 2086944 - 2087507 | 20762.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





