Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dgtpase | D3C88_14865 | Not Available | Negative | 2073757 - 2074253 | 19107.7 |
| pts sugar transporter subunit iibc | D3C88_14870 | Not Available | Positive | 2074254 - 2075015 | 27199.5 |
| isocitrate lyase | D3C88_14875 | Not Available | Negative | 2075183 - 2075783 | 21757.9 |
| malate synthase a | D3C88_14880 | Not Available | Negative | 2075813 - 2076089 | 10350.4 |
| hydrogenase formation protein hypd | D3C88_14885 | Not Available | Negative | 2076090 - 2076833 | 27609.7 |
| hydrogenase assembly protein hypc | D3C88_14890 | Not Available | Negative | 2076833 - 2077105 | 9732.58 |
| hydrogenase accessory protein hypb | D3C88_14895 | Not Available | Negative | 2077096 - 2077368 | 10110.2 |
| post-segregation killing protein pndc | D3C88_14900 | Not Available | Negative | 2077369 - 2077461 | 3501.15 |
| hypothetical protein | D3C88_14905 | Not Available | Negative | 2077484 - 2077729 | 8456.72 |
| hypothetical protein | D3C88_14910 | Not Available | Negative | 2077705 - 2077962 | 8902.59 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





