Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | D3C88_14815 | Not Available | Positive | 2067523 - 2070579 | 113355.0 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | D3C88_14820 | Not Available | Positive | 2070576 - 2070986 | 14912.2 |
| hypothetical protein | D3C88_14825 | Not Available | Positive | 2071005 - 2071274 | 10480.6 |
| iron-sulfur cluster assembly accessory protein | D3C88_14830 | Not Available | Positive | 2071823 - 2072191 | 13314.9 |
| fe-s cluster assembly protein sufb | D3C88_14835 | Not Available | Positive | 2072200 - 2072657 | 17137.7 |
| hypothetical protein | D3C88_14840 | Not Available | Negative | 2072658 - 2072879 | 8239.64 |
| abc transporter atpase | D3C88_14845 | Not Available | Positive | 2072936 - 2073215 | 10296.2 |
| epimerase | D3C88_14850 | Not Available | Negative | 2073216 - 2073351 | 5013.89 |
| pts sugar transporter subunit iia | D3C88_14855 | Not Available | Negative | 2073363 - 2073444 | 2636.04 |
| chemotaxis protein | D3C88_14860 | Not Available | Negative | 2073445 - 2073760 | 11572.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





