Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | D3C88_14710 | Not Available | Negative | 2058441 - 2058560 | 4374.25 |
| cu+ exporting atpase | D3C88_14715 | Not Available | Negative | 2058561 - 2058951 | 13974.8 |
| hypothetical protein | D3C88_14720 | Not Available | Positive | 2058952 - 2059216 | 8475.35 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | D3C88_14725 | Not Available | Positive | 2059217 - 2059955 | 26424.3 |
| pp_02905 | D3C88_14730 | Not Available | Negative | 2059997 - 2060329 | Not Available |
| duf987 domain-containing protein | D3C88_14735 | Not Available | Positive | 2060641 - 2060862 | 8411.2 |
| type iv toxin-antitoxin system yeeu family antitoxin | D3C88_14740 | Not Available | Positive | 2060941 - 2061100 | 5958.99 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | D3C88_14745 | Not Available | Negative | 2061251 - 2061778 | 19374.5 |
| molybdenum cofactor guanylyltransferase | D3C88_14750 | Not Available | Negative | 2061760 - 2062344 | 21788.4 |
| duf1040 family protein | D3C88_14755 | Not Available | Positive | 2062414 - 2062683 | 10273.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





