Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | D3C88_14610 | Not Available | Negative | 2046404 - 2047302 | 34202.6 |
| flagellar hook-length control protein flik | D3C88_14615 | Not Available | Positive | 2047303 - 2047792 | 17477.4 |
| type vi secretion system membrane subunit tssm | D3C88_14620 | Not Available | Negative | 2047793 - 2048312 | 20135.6 |
| hypothetical protein | D3C88_14625 | Not Available | Positive | 2048346 - 2048787 | 16542.9 |
| duf1327 domain-containing protein | D3C88_14630 | Not Available | Positive | 2048805 - 2049131 | 12096.5 |
| lysozyme | D3C88_14635 | Not Available | Positive | 2049195 - 2049475 | 10125.4 |
| hypothetical protein | D3C88_14640 | Not Available | Positive | 2049476 - 2050028 | 20737.9 |
| duf3418 domain-containing protein | D3C88_14645 | Not Available | Positive | 2050029 - 2050755 | 28240.8 |
| iron abc transporter permease | D3C88_14650 | Not Available | Negative | 2050756 - 2051761 | 35770.5 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | D3C88_14655 | Not Available | Negative | 2051758 - 2052432 | 25047.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





