Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is200/is605-like element is200c family transposase | D3C88_14455 | Not Available | Positive | 2032118 - 2032348 | 8913.84 |
| hypothetical protein | D3C88_14460 | Not Available | Positive | 2032349 - 2032534 | 6818.21 |
| nucleotide exchange factor grpe | D3C88_14465 | Not Available | Negative | 2032589 - 2033182 | 21857.1 |
| molecular chaperone grpe | D3C88_14470 | Not Available | Negative | 2033179 - 2033343 | 6040.33 |
| nad(+) kinase | D3C88_14475 | Not Available | Positive | 2033305 - 2033422 | 4567.66 |
| cyclopropane fatty acyl phospholipid synthase | D3C88_14480 | Not Available | Positive | 2033423 - 2034390 | 37304.6 |
| riboflavin synthase | D3C88_14485 | Not Available | Negative | 2034430 - 2035071 | 23446.3 |
| multidrug efflux mate transporter mdtk | D3C88_14490 | Not Available | Positive | 2035286 - 2036590 | 46778.7 |
| integrase | D3C88_14495 | Not Available | Positive | 2036591 - 2036863 | 10022.1 |
| nadh-ubiquinone oxidoreductase chain g | D3C88_14500 | Not Available | Negative | 2036864 - 2037040 | 6430.56 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





