Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthase | D3C88_14245 | Not Available | Negative | 2010788 - 2010934 | 5436.31 |
| is200/is605 family transposase | D3C88_14250 | Not Available | Positive | 2010935 - 2011165 | 8929.89 |
| energy-coupling factor transporter transmembrane protein ecft | D3C88_14255 | Not Available | Negative | 2011166 - 2011252 | 3217.06 |
| ecf transporter s component | D3C88_14260 | Not Available | Negative | 2011253 - 2011831 | 20224.9 |
| duf296 domain-containing protein | D3C88_14265 | Not Available | Negative | 2011854 - 2012051 | 7062.62 |
| s1 rna-binding domain-containing protein | D3C88_14270 | Not Available | Positive | 2012052 - 2012335 | 10105.2 |
| ferrous iron transporter a | D3C88_14280 | Not Available | Positive | 2012775 - 2013002 | 8371.31 |
| fe(2+) transporter permease subunit feob | D3C88_14285 | Not Available | Positive | 2013019 - 2014544 | 55824.0 |
| o-succinylhomoserine (thiol)-lyase | D3C88_14290 | Not Available | Positive | 2014545 - 2014728 | 6079.15 |
| aspartate kinase | D3C88_14295 | Not Available | Positive | 2014731 - 2016034 | 47270.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





