Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dethiobiotin synthase | D3C88_01025 | Not Available | Positive | 161053 - 161435 | 13670.4 |
| inovirus gp2 family protein | D3C88_01030 | Not Available | Positive | 161456 - 162196 | 27962.3 |
| hypothetical protein | D3C88_01035 | Not Available | Positive | 162284 - 162502 | 8271.66 |
| tonb-dependent siderophore receptor irea | D3C88_01040 | Not Available | Positive | 162978 - 165026 | 75295.3 |
| hypothetical protein | D3C88_01055 | Not Available | Negative | 166871 - 167034 | 6031.38 |
| inverse autotransporter invasin ycho | D3C88_01060 | Not Available | Positive | 167219 - 168613 | 52092.6 |
| dna-binding response regulator | D3C88_01065 | Not Available | Negative | 168614 - 169264 | 23928.3 |
| nitrate/nitrite two-component system sensor histidine kinase narx | D3C88_01070 | Not Available | Negative | 169257 - 170062 | 30166.0 |
| nucleoside-specific channel-forming protein tsx | D3C88_01075 | Not Available | Positive | 170063 - 170540 | 18004.5 |
| hnh nuclease family protein | D3C88_01080 | Not Available | Negative | 170578 - 170925 | 13422.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





