Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3C88_14190 | Not Available | Negative | 2004294 - 2004515 | 8545.9 |
| membrane protein insertion efficiency factor yidd | D3C88_14195 | Not Available | Positive | 2004516 - 2004579 | 2137.4 |
| membrane protein insertase yidc | D3C88_14200 | Not Available | Positive | 2004582 - 2005167 | 21243.8 |
| anaerobic nitric oxide reductase flavorubredoxin | D3C88_14205 | Not Available | Positive | 2005168 - 2005754 | 21903.3 |
| ribulokinase | D3C88_14210 | Not Available | Negative | 2005755 - 2006473 | 26507.0 |
| arabinose operon transcriptional regulator arac | D3C88_14220 | Not Available | Positive | 2006812 - 2007657 | 32183.3 |
| hypothetical protein | D3C88_14225 | Not Available | Positive | 2008172 - 2009020 | 33007.3 |
| hypothetical protein | D3C88_14230 | Not Available | Positive | 2009027 - 2009449 | 17141.5 |
| deda family protein | D3C88_14235 | Not Available | Positive | 2009604 - 2010368 | 28302.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D3C88_14240 | Not Available | Negative | 2010378 - 2010791 | 15201.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





