Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(65) synthase truc | D3C88_14085 | Not Available | Negative | 1991796 - 1992197 | 14966.8 |
| flagellar biosynthesis protein flgn | D3C88_14090 | Not Available | Positive | 1992198 - 1992296 | 3495.18 |
| lipid ii flippase murj | D3C88_14095 | Not Available | Negative | 1992336 - 1992889 | 20034.7 |
| abc transporter atp-binding protein | D3C88_14100 | Not Available | Positive | 1992890 - 1993668 | 28651.7 |
| type vi secretion system protein impl | D3C88_14105 | Not Available | Negative | 1993669 - 1993903 | 8531.06 |
| host specificity protein j | D3C88_14110 | Not Available | Positive | 1993904 - 1994179 | 10285.3 |
| maturase | D3C88_14115 | Not Available | Positive | 1994180 - 1994481 | 11474.0 |
| 4,5-dopa dioxygenase extradiol | D3C88_14120 | Not Available | Positive | 1994482 - 1995024 | 19718.6 |
| protein-disulfide oxidoreductase dsbi | D3C88_14125 | Not Available | Negative | 1995070 - 1995741 | 25118.3 |
| thiol:disulfide interchange protein dsba/dsbl | D3C88_14130 | Not Available | Negative | 1995756 - 1996424 | 24381.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





