Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D3C88_13780 | Not Available | Negative | 1949772 - 1950104 | 12668.1 |
| ketol-acid reductoisomerase | D3C88_13785 | Not Available | Positive | 1950254 - 1950814 | 20555.7 |
| atp-binding cassette domain-containing protein | D3C88_13790 | Not Available | Negative | 1950815 - 1951784 | 35803.9 |
| beta-aspartyl-peptidase | D3C88_13795 | Not Available | Negative | 1951771 - 1952736 | 33304.9 |
| molybdopterin molybdotransferase | D3C88_13800 | Not Available | Positive | 1952940 - 1954175 | 44011.7 |
| molybdopterin-synthase adenylyltransferase moeb | D3C88_13805 | Not Available | Positive | 1954175 - 1954718 | 19494.4 |
| type vi secretion system protein tssa | D3C88_13810 | Not Available | Negative | 1954719 - 1955277 | 20458.2 |
| baseplate protein | D3C88_13815 | Not Available | Negative | 1955278 - 1955648 | 13654.4 |
| baseplate protein | D3C88_13820 | Not Available | Negative | 1955639 - 1955717 | 2954.46 |
| Trna-ala | Not Available | Not Available | Positive | 1957525 - 1957600 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





