Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase | D3C88_13730 | Not Available | Negative | 1943323 - 1944400 | 39590.1 |
| phosphoenolpyruvate--protein phosphotransferase | D3C88_13735 | Not Available | Positive | 1944401 - 1945172 | 28072.5 |
| nadh-quinone oxidoreductase subunit nuok | D3C88_13740 | Not Available | Negative | 1945173 - 1945446 | 9870.63 |
| nadh-quinone oxidoreductase subunit j | D3C88_13745 | Not Available | Negative | 1945443 - 1945997 | 19875.9 |
| nadh-quinone oxidoreductase subunit i | D3C88_13750 | Not Available | Negative | 1946009 - 1946309 | 11401.5 |
| trna 2-thiouridine(34) synthase mnma | D3C88_13755 | Not Available | Negative | 1946310 - 1946992 | 25641.7 |
| hypothetical protein | D3C88_13760 | Not Available | Negative | 1946993 - 1947966 | 36506.9 |
| succinate dehydrogenase iron-sulfur subunit | D3C88_13765 | Not Available | Negative | 1948327 - 1949043 | 26785.4 |
| succinate dehydrogenase | D3C88_13770 | Not Available | Negative | 1949059 - 1949462 | 15471.3 |
| lysis protein | D3C88_13775 | Not Available | Positive | 1949463 - 1949771 | 11044.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





