Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | D3C88_00970 | Not Available | Positive | 152947 - 153789 | 31231.1 |
| alcohol dehydrogenase | D3C88_00975 | Not Available | Positive | 153820 - 154872 | 38200.6 |
| sugar phosphate isomerase/epimerase | D3C88_00980 | Not Available | Positive | 154891 - 155679 | 29789.5 |
| hypothetical protein | D3C88_00985 | Not Available | Positive | 155689 - 155927 | 8516.21 |
| serine protease | D3C88_00990 | Not Available | Negative | 155928 - 156311 | 13690.3 |
| hypothetical protein | D3C88_00995 | Not Available | Negative | 156411 - 156494 | 3206.2 |
| acid shock protein | D3C88_01000 | Not Available | Negative | 156587 - 156922 | 11579.1 |
| mfs transporter | D3C88_01010 | Not Available | Negative | 157320 - 158573 | 45231.1 |
| lysr family transcriptional regulator | D3C88_01015 | Not Available | Positive | 158680 - 159573 | 33333.4 |
| rok family transcriptional regulator | D3C88_01020 | Not Available | Positive | 159708 - 160928 | 44292.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





