Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxg | D3C88_13680 | Not Available | Negative | 1936042 - 1936662 | 21890.1 |
| electron transport complex subunit rsxd | D3C88_13685 | Not Available | Negative | 1936666 - 1937364 | 25257.0 |
| pts maltose transporter subunit iicb | D3C88_13690 | Not Available | Negative | 1937365 - 1938331 | 34377.0 |
| mal regulon transcriptional regulator mali | D3C88_13695 | Not Available | Positive | 1938506 - 1939044 | 18825.7 |
| phage tail tape measure protein | D3C88_13700 | Not Available | Positive | 1939045 - 1939380 | 12567.6 |
| galactose-1-phosphate uridylyltransferase | D3C88_13705 | Not Available | Negative | 1939381 - 1939787 | 15077.7 |
| udp-glucose 4-epimerase gale | D3C88_13710 | Not Available | Negative | 1939797 - 1940813 | 37220.1 |
| na+/h+ antiporter | D3C88_13715 | Not Available | Negative | 1940939 - 1941727 | 29674.5 |
| 6-phospho-beta-glucosidase | D3C88_13720 | Not Available | Positive | 1941728 - 1942506 | 28883.8 |
| chitooligosaccharide deacetylase | D3C88_13725 | Not Available | Positive | 1942519 - 1943277 | 27987.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





