Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin family protein | D3C88_13630 | Not Available | Positive | 1931217 - 1931761 | 19588.2 |
| penicillin-binding protein 1c | D3C88_13635 | Not Available | Positive | 1931762 - 1932283 | 19771.1 |
| rod shape-determining protein | D3C88_13640 | Not Available | Negative | 1932284 - 1932539 | 9293.07 |
| 30s ribosomal protein s6 | D3C88_13645 | Not Available | Positive | 1932540 - 1932845 | 11655.6 |
| glycosyltransferase family 2 protein | D3C88_13650 | Not Available | Positive | 1932883 - 1933380 | 18005.0 |
| abc transporter atp-binding protein | D3C88_13655 | Not Available | Positive | 1933413 - 1934117 | 26449.0 |
| sel1 repeat family protein | D3C88_13660 | Not Available | Positive | 1934228 - 1934393 | 6176.28 |
| flagellar m-ring protein flif | D3C88_13665 | Not Available | Negative | 1934394 - 1934803 | 15428.4 |
| flagellar m-ring protein flif | D3C88_13670 | Not Available | Positive | 1934804 - 1935788 | 35132.1 |
| electron transport complex subunit rsxe | D3C88_13675 | Not Available | Negative | 1935789 - 1936038 | 8828.12 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





