Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colanic acid biosynthesis glycosyltransferase wcai | D3C88_13580 | Not Available | Negative | 1925331 - 1926168 | 30902.6 |
| gdp-mannose mannosyl hydrolase | D3C88_13585 | Not Available | Negative | 1926165 - 1926446 | 10664.4 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | D3C88_13590 | Not Available | Positive | 1926447 - 1926784 | 12715.4 |
| atp-dependent dna helicase rep | D3C88_13595 | Not Available | Negative | 1926831 - 1928253 | 54965.8 |
| hth-type transcriptional activator rhas | D3C88_13600 | Not Available | Positive | 1928445 - 1928893 | 17134.0 |
| phage tail assembly protein t | D3C88_13605 | Not Available | Negative | 1928894 - 1929322 | 16083.0 |
| phage minor tail protein g | D3C88_13610 | Not Available | Negative | 1929304 - 1929726 | 15386.0 |
| phage tail protein | D3C88_13615 | Not Available | Negative | 1929742 - 1930482 | 25733.9 |
| Trna-phe | Not Available | Not Available | Positive | 1930567 - 1930642 | Not Available |
| duf4102 domain-containing protein | D3C88_13625 | Not Available | Positive | 1930840 - 1931216 | 14403.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





