Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspk | D3C88_13475 | Not Available | Negative | 1912684 - 1913661 | 36514.3 |
| type ii secretion system protein gspj | D3C88_13480 | Not Available | Negative | 1913658 - 1914263 | 22271.3 |
| type ii secretion system protein gspi | D3C88_13485 | Not Available | Negative | 1914260 - 1914568 | 11443.6 |
| pts sugar transporter subunit iia | D3C88_13490 | Not Available | Positive | 1914580 - 1914912 | 12265.6 |
| nudix hydrolase | D3C88_13495 | Not Available | Negative | 1914913 - 1915049 | 5368.38 |
| phosphodiesterase | D3C88_13500 | Not Available | Negative | 1915107 - 1915470 | 13195.8 |
| pts mannose/fructose/sorbose transporter family subunit iid | D3C88_13505 | Not Available | Negative | 1915471 - 1915956 | 17737.6 |
| pts mannose/fructose/sorbose/n-acetylgalactosamine transporter subunit iic | D3C88_13510 | Not Available | Negative | 1915946 - 1916725 | 27350.5 |
| pts n-acetylgalactosamine transporter subunit iib | D3C88_13515 | Not Available | Negative | 1916736 - 1917209 | 17072.9 |
| kila-n domain-containing protein | D3C88_13520 | Not Available | Negative | 1917291 - 1918090 | 29602.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





