Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid phosphatase apha | D3C88_13375 | Not Available | Positive | 1900883 - 1901596 | 26076.9 |
| thiamine phosphate synthase | D3C88_13380 | Not Available | Positive | 1901707 - 1902123 | 15626.7 |
| mmcq/yjbr family dna-binding protein | D3C88_13385 | Not Available | Positive | 1902127 - 1902483 | 13520.2 |
| excinuclease abc subunit a | D3C88_13390 | Not Available | Negative | 1902518 - 1905340 | 103890.0 |
| ssdna-binding protein | D3C88_13395 | Not Available | Positive | 1905594 - 1906130 | 18976.1 |
| hypothetical protein | D3C88_13400 | Not Available | Negative | 1906229 - 1906510 | 10288.0 |
| site-specific tyrosine recombinase xerd | D3C88_13405 | Not Available | Negative | 1906547 - 1907036 | 18719.7 |
| flavodoxin-2 | D3C88_13410 | Not Available | Positive | 1907148 - 1907669 | 19701.2 |
| hypothetical protein | D3C88_13415 | Not Available | Negative | 1907709 - 1908011 | 12012.8 |
| phage major tail tube protein | D3C88_13420 | Not Available | Positive | 1908012 - 1908094 | 2911.45 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





