Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf890 domain-containing protein | D3C88_13270 | Not Available | Negative | 1887162 - 1887460 | 11387.7 |
| hth-type transcriptional activator alls | D3C88_13275 | Not Available | Positive | 1887461 - 1887641 | 6655.08 |
| trna 2-selenouridine(34) synthase mnmh | D3C88_13280 | Not Available | Positive | 1887710 - 1888193 | 17625.4 |
| signal recognition particle-docking protein ftsy | D3C88_13285 | Not Available | Positive | 1888194 - 1888760 | 20828.9 |
| pqia/yebs family transporter subunit | D3C88_13290 | Not Available | Positive | 1888761 - 1889862 | 41357.9 |
| mce family protein | D3C88_13295 | Not Available | Positive | 1889831 - 1891106 | 46104.5 |
| 50s ribosomal protein l29 | D3C88_13300 | Not Available | Negative | 1891107 - 1891212 | 4090.98 |
| 50s ribosomal protein l16 | D3C88_13305 | Not Available | Negative | 1891212 - 1891622 | 15282.1 |
| 30s ribosomal protein s3 | D3C88_13310 | Not Available | Negative | 1891635 - 1892336 | 25984.8 |
| 50s ribosomal protein l22 | D3C88_13315 | Not Available | Negative | 1892354 - 1892472 | 4365.46 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





