Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase | D3C88_13165 | Not Available | Positive | 1869928 - 1870074 | 6062.74 |
| glycine zipper 2tm domain-containing protein | D3C88_13170 | Not Available | Positive | 1870177 - 1870695 | 17690.1 |
| hypothetical protein | D3C88_13175 | Not Available | Positive | 1870711 - 1871250 | 20245.4 |
| glutamine-hydrolyzing gmp synthase | D3C88_13180 | Not Available | Negative | 1871344 - 1872921 | 58624.5 |
| imp dehydrogenase | D3C88_13185 | Not Available | Negative | 1872990 - 1874135 | 40298.3 |
| oxygen-insensitive nadph nitroreductase | D3C88_13190 | Not Available | Positive | 1874136 - 1874772 | 23528.2 |
| hypothetical protein | D3C88_13195 | Not Available | Positive | 1874833 - 1875160 | 12234.1 |
| abc transporter substrate-binding protein | D3C88_13200 | Not Available | Positive | 1875161 - 1875626 | 18094.5 |
| l-rhamnose isomerase | D3C88_13205 | Not Available | Negative | 1875903 - 1876147 | 9302.18 |
| lipoate--protein ligase lpla | D3C88_13210 | Not Available | Negative | 1876148 - 1876552 | 15101.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





