Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase pentaheme subunit | D3C88_13065 | Not Available | Negative | 1856949 - 1857515 | 20657.6 |
| ammonia-forming cytochrome c nitrite reductase subunit c552 | D3C88_13070 | Not Available | Negative | 1857560 - 1858996 | 53678.6 |
| hypothetical protein | D3C88_13075 | Not Available | Negative | 1858917 - 1859114 | 7772.32 |
| hypothetical protein | D3C88_13080 | Not Available | Negative | 1859092 - 1859277 | 7236.26 |
| hypothetical protein | D3C88_13085 | Not Available | Positive | 1859388 - 1860283 | 33127.3 |
| mosc domain-containing protein | D3C88_13090 | Not Available | Negative | 1860284 - 1860793 | 18566.8 |
| aliphatic sulfonate abc transporter atp-binding protein | D3C88_13095 | Not Available | Negative | 1861157 - 1861924 | 27710.8 |
| abc transporter permease subunit | D3C88_13100 | Not Available | Negative | 1861921 - 1862229 | 11100.0 |
| hydrogenase nickel incorporation protein hypb | D3C88_13105 | Not Available | Negative | 1862230 - 1862692 | 16685.8 |
| protein hypa | D3C88_13110 | Not Available | Negative | 1862696 - 1863046 | 13168.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





