Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | D3C88_12960 | Not Available | Negative | 1846823 - 1847827 | 37201.6 |
| d-alanine--poly(phosphoribitol) ligase subunit dlta | D3C88_12965 | Not Available | Positive | 1847896 - 1848287 | 13634.1 |
| iron abc transporter permease | D3C88_12970 | Not Available | Negative | 1848288 - 1848924 | 22778.6 |
| o-succinylbenzoate synthase | D3C88_12975 | Not Available | Negative | 1848925 - 1849655 | 27157.5 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | D3C88_12980 | Not Available | Negative | 1849655 - 1849750 | 3795.47 |
| xaa-pro dipeptidase | D3C88_12985 | Not Available | Negative | 1849751 - 1850317 | 21570.9 |
| fatty acid oxidation complex subunit alpha fadb | D3C88_12990 | Not Available | Positive | 1850507 - 1851284 | 27620.7 |
| iron abc transporter permease | D3C88_12995 | Not Available | Negative | 1851285 - 1851584 | 10976.0 |
| abc transporter substrate-binding protein | D3C88_13000 | Not Available | Negative | 1851603 - 1852277 | 25272.1 |
| inovirus gp2 family protein | D3C88_13005 | Not Available | Negative | 1852589 - 1852674 | 3050.53 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





