Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mreb | D3C88_12910 | Not Available | Positive | 1841299 - 1841853 | 19458.6 |
| hypothetical protein | D3C88_12915 | Not Available | Positive | 1841854 - 1842340 | 18969.7 |
| Trna-met | Not Available | Not Available | Positive | 1842523 - 1842599 | Not Available |
| murein transglycosylase a | D3C88_12925 | Not Available | Positive | 1842607 - 1842843 | 9593.26 |
| 2-iminobutanoate/2-iminopropanoate deaminase | D3C88_12930 | Not Available | Negative | 1842844 - 1843049 | 6958.39 |
| aspartate carbamoyltransferase regulatory subunit | D3C88_12935 | Not Available | Negative | 1843122 - 1843583 | 17121.6 |
| aspartate carbamoyltransferase catalytic subunit | D3C88_12940 | Not Available | Negative | 1843596 - 1844531 | 34429.3 |
| pyrbi operon leader peptide | D3C88_12945 | Not Available | Negative | 1844535 - 1844669 | 5098.43 |
| argr family transcriptional regulator | D3C88_12950 | Not Available | Negative | 1844759 - 1845247 | 18270.3 |
| yfcc family protein | D3C88_12955 | Not Available | Negative | 1845363 - 1846766 | 49916.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





