Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l14 | D3C88_12860 | Not Available | Positive | 1837298 - 1837669 | 13541.9 |
| 50s ribosomal protein l24 | D3C88_12865 | Not Available | Positive | 1837680 - 1837994 | 11346.9 |
| 50s ribosomal protein l5 | D3C88_12870 | Not Available | Positive | 1838009 - 1838548 | 20302.7 |
| 30s ribosomal protein s14 | D3C88_12875 | Not Available | Positive | 1838563 - 1838767 | 7805.37 |
| hydroxylamine reductase | D3C88_12880 | Not Available | Positive | 1838768 - 1839044 | 9697.06 |
| nadh oxidoreductase | D3C88_12885 | Not Available | Positive | 1839056 - 1839167 | 4537.43 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | D3C88_12890 | Not Available | Positive | 1839168 - 1839401 | 8280.05 |
| hypothetical protein | D3C88_12895 | Not Available | Negative | 1839442 - 1839627 | 6865.19 |
| isncy family transposase | D3C88_12900 | Not Available | Negative | 1839640 - 1840599 | 37100.5 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | D3C88_12905 | Not Available | Negative | 1840792 - 1841298 | 18774.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





