Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-methylcitrate dehydratase/aconitate hydratase | D3C88_12760 | Not Available | Negative | 1825500 - 1826193 | 26618.7 |
| dna repair protein | D3C88_12765 | Not Available | Negative | 1826194 - 1826442 | 9570.57 |
| antirestriction protein | D3C88_12770 | Not Available | Negative | 1826487 - 1826842 | 13389.8 |
| peptidoglycan endopeptidase | D3C88_12775 | Not Available | Negative | 1826843 - 1827108 | 10041.7 |
| hypothetical protein | D3C88_12780 | Not Available | Positive | 1827109 - 1827245 | 4713.38 |
| phage tail protein | D3C88_12785 | Not Available | Positive | 1827397 - 1827479 | 3013.85 |
| hth-type transcriptional regulator eutr | D3C88_12790 | Not Available | Negative | 1827480 - 1827948 | 17771.0 |
| ethanolamine utilization protein eutk | D3C88_12795 | Not Available | Negative | 1827994 - 1828259 | 9713.53 |
| phage tail tape measure protein | D3C88_12800 | Not Available | Negative | 1828260 - 1828961 | 26207.3 |
| mfs transporter | D3C88_12805 | Not Available | Positive | 1828962 - 1829611 | 22846.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





