Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit secg | D3C88_12655 | Not Available | Positive | 1813728 - 1813896 | 5824.87 |
| brnt family toxin | D3C88_12665 | Not Available | Positive | 1814202 - 1814489 | 11296.4 |
| toxin-antitoxin system, antitoxin component | D3C88_12670 | Not Available | Positive | 1814476 - 1814778 | 11522.6 |
| gtpase | D3C88_12675 | Not Available | Negative | 1814812 - 1815598 | 29490.3 |
| m48 family peptidase | D3C88_12680 | Not Available | Negative | 1815599 - 1815764 | 6404.53 |
| hypothetical protein | D3C88_12685 | Not Available | Positive | 1815849 - 1816075 | 8352.74 |
| cbs domain-containing protein | D3C88_12690 | Not Available | Positive | 1816076 - 1816272 | 6689.09 |
| nitric oxide reductase transcription regulator | D3C88_12695 | Not Available | Negative | 1816269 - 1817063 | 29420.4 |
| tigr01777 family protein | D3C88_12700 | Not Available | Negative | 1817064 - 1817777 | 26091.6 |
| dihydroneopterin triphosphate 2'-epimerase | D3C88_12705 | Not Available | Negative | 1817798 - 1817916 | 4540.36 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





