Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s1 | D3C88_12555 | Not Available | Positive | 1800139 - 1801135 | 37083.5 |
| abc transporter atp-binding protein | D3C88_12560 | Not Available | Positive | 1801136 - 1801573 | 16368.2 |
| pqia/yebs family transporter subunit | D3C88_12565 | Not Available | Positive | 1801703 - 1802242 | 19902.0 |
| dicarboxylate transporter/tellurite-resistance protein teha | D3C88_12570 | Not Available | Positive | 1802243 - 1802560 | 11671.5 |
| scaffolding protein | D3C88_12575 | Not Available | Positive | 1802561 - 1803327 | 28943.2 |
| coat protein | D3C88_12580 | Not Available | Positive | 1803346 - 1804193 | 30784.4 |
| leucine abc transporter subunit substrate-binding protein livk | D3C88_12585 | Not Available | Negative | 1804194 - 1804927 | 25963.2 |
| pts sugar transporter subunit iia | D3C88_12590 | Not Available | Positive | 1805862 - 1806263 | 14709.8 |
| pts mannose/fructose/sorbose transporter subunit iib | D3C88_12595 | Not Available | Positive | 1806270 - 1806755 | 18293.2 |
| pts sugar transporter subunit iic | D3C88_12600 | Not Available | Positive | 1806772 - 1807518 | 26448.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





