Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | D3C88_12505 | Not Available | Negative | 1789893 - 1790687 | 30481.4 |
| prolipoprotein diacylglyceryl transferase | D3C88_12510 | Not Available | Negative | 1790694 - 1791569 | 33109.9 |
| phosphoenolpyruvate-protein phosphotransferase ptsp | D3C88_12515 | Not Available | Negative | 1791720 - 1793966 | 83732.8 |
| rna pyrophosphohydrolase | D3C88_12520 | Not Available | Negative | 1793979 - 1794509 | 20796.0 |
| dna mismatch repair protein muth | D3C88_12525 | Not Available | Positive | 1795194 - 1795489 | 10539.7 |
| dna-directed rna polymerase subunit beta' | D3C88_12530 | Not Available | Negative | 1795490 - 1796761 | 48815.0 |
| (2e,6e)-farnesyl diphosphate synthase | D3C88_12535 | Not Available | Positive | 1796923 - 1797822 | 32180.6 |
| zn-dependent alcohol dehydrogenase | D3C88_12540 | Not Available | Negative | 1797908 - 1798158 | 9009.93 |
| aldolase | D3C88_12545 | Not Available | Negative | 1798191 - 1799078 | 31713.5 |
| sulfolactaldehyde 3-reductase | D3C88_12550 | Not Available | Negative | 1799103 - 1799981 | 30490.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





