Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin biosynthesis protein moeb | D3C88_12170 | Not Available | Negative | 1748594 - 1748734 | 4814.78 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | D3C88_12175 | Not Available | Negative | 1748735 - 1749255 | 18597.4 |
| aspartate 1-decarboxylase autocleavage activator panm | D3C88_12180 | Not Available | Positive | 1749679 - 1750062 | 14573.4 |
| flagellar biosynthesis protein flha | D3C88_12185 | Not Available | Positive | 1750317 - 1751183 | 31253.0 |
| aldo/keto reductase | D3C88_12190 | Not Available | Positive | 1751184 - 1751475 | 10747.8 |
| tigr00645 family protein | D3C88_12195 | Not Available | Negative | 1751515 - 1752009 | 18642.3 |
| nad(p)-dependent oxidoreductase | D3C88_12200 | Not Available | Positive | 1752200 - 1753084 | 31489.8 |
| biopolymer transporter exbd | D3C88_12205 | Not Available | Negative | 1753123 - 1753548 | 15527.9 |
| biopolymer transporter exbb | D3C88_12210 | Not Available | Negative | 1753555 - 1754289 | 26289.0 |
| hypothetical protein | D3C88_12215 | Not Available | Negative | 1754282 - 1754437 | 5991.37 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





