Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactonate oxidoreductase | D3C88_11895 | Not Available | Positive | 1709617 - 1709928 | 11620.0 |
| phosphoglycerol transferase i | D3C88_11900 | Not Available | Negative | 1710065 - 1710943 | 33112.6 |
| formate dehydrogenase accessory protein fdhe | D3C88_11905 | Not Available | Negative | 1710944 - 1711220 | 10538.8 |
| aldehyde dehydrogenase eute | D3C88_11910 | Not Available | Positive | 1711375 - 1712522 | 39994.6 |
| ethanolamine utilization protein eutj | D3C88_11915 | Not Available | Positive | 1712533 - 1713369 | 29958.7 |
| hypothetical protein | D3C88_11920 | Not Available | Negative | 1713377 - 1713667 | 10786.1 |
| flagellar biosynthetic protein flhb | D3C88_11925 | Not Available | Negative | 1713660 - 1714808 | 42240.4 |
| protein phosphatase chez | D3C88_11930 | Not Available | Negative | 1715017 - 1715232 | 7978.61 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | D3C88_11935 | Not Available | Positive | 1715233 - 1715766 | 19086.9 |
| hypothetical protein | D3C88_11940 | Not Available | Negative | 1715767 - 1715923 | 6072.31 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





