Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitermination protein | D3C88_11845 | Not Available | Negative | 1703928 - 1704551 | 22461.0 |
| protein ninh | D3C88_11850 | Not Available | Negative | 1704548 - 1704640 | 3435.29 |
| galactokinase | D3C88_11855 | Not Available | Negative | 1704641 - 1705221 | 21096.0 |
| galactose-1-phosphate uridylyltransferase | D3C88_11860 | Not Available | Negative | 1705225 - 1705450 | 8571.07 |
| parb/repb/spo0j family plasmid partition protein | D3C88_11865 | Not Available | Negative | 1705645 - 1706634 | 36643.8 |
| plasmid-partitioning protein sopa | D3C88_11870 | Not Available | Negative | 1706631 - 1707800 | 43774.5 |
| wyl domain-containing protein | D3C88_11875 | Not Available | Positive | 1708290 - 1708610 | 12406.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D3C88_11880 | Not Available | Negative | 1708611 - 1709175 | 21019.3 |
| hypothetical protein | D3C88_11885 | Not Available | Negative | 1709176 - 1709385 | 7615.31 |
| dini family protein | D3C88_11890 | Not Available | Positive | 1709496 - 1709616 | 4838.89 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





