Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid stability protein | D3C88_11630 | Not Available | Positive | 1679667 - 1680059 | 14539.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | D3C88_11635 | Not Available | Positive | 1680168 - 1680507 | 12309.9 |
| aminopeptidase n | D3C88_11640 | Not Available | Negative | 1680508 - 1683015 | 95153.6 |
| hypothetical protein | D3C88_11645 | Not Available | Positive | 1683134 - 1683392 | 9277.16 |
| inovirus gp2 family protein | D3C88_11650 | Not Available | Positive | 1683393 - 1683665 | 10207.1 |
| alpha-2-macroglobulin family protein | D3C88_11655 | Not Available | Negative | 1683666 - 1685186 | 55407.6 |
| rna polymerase sigma factor rpoh | D3C88_11660 | Not Available | Negative | 1685187 - 1685800 | 23407.2 |
| cell division protein ftsx | D3C88_11665 | Not Available | Negative | 1686045 - 1686253 | 7488.41 |
| trna pseudouridine(65) synthase truc | D3C88_11670 | Not Available | Negative | 1686254 - 1686488 | 8987.91 |
| duf3486 family protein | D3C88_11675 | Not Available | Negative | 1686624 - 1686870 | 9406.12 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





